miRBase entry: odi-mir-1486

Stem-loop odi-mir-1486


Accession
MI0007097
Description
Oikopleura dioica odi-mir-1486 precursor miRNA


Sequence

cuuaaccgguugccaCUAGGUGGUUUUUUCGAUGAAGGUgcccaguaaacuggguacccucccgaauuaaaacacuuacuauuuauagugauaaaaaauuuuau
.............(((((((((.((..((((..((.(((((((((....))))))))).)).))))..))..)))).........)))))..............

Structure
-cuuaaccgguugc     ---------    -G  UU    AU  A         u 
              caCUA         GGUG  UU  UUCG  GA GGUgcccag a
              |||||         ||||  ||  ||||  || |||||||||  
              gugau         ucac  aa  aagc  cu ccauggguc a
uauuuuaaaaaaua     auuuaucau    aa  uu    -c  c         a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature odi-miR-1486

Accession MIMAT0006039
Description Oikopleura dioica odi-miR-1486 mature miRNA
Sequence 16 - CUAGGUGGUUUUUUCGAUGAAGGU - 39
Evidence experimental
cloned [1]

References

  1. PubMed ID: 18339653
    Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
    "Fu X, Adamski M, Thompson EM"
    "Mol Biol Evol (2008) 25:1067-1080