Stem-loop odi-mir-1490a-1

Accession

MI0007100

Description

Oikopleura dioica odi-mir-1490a-1 precursor miRNA

Gene family

MIPF0000525; mir-1490

Sequence

ggcucguuuacaguuAGGCAGUGAGUUGAUAGCGCCCUGAaauggaaaaaucagggccucucacccacuaccaugacuguacuugcccuauucgacccucuc
(((..((..(((((((((.((((.(.(((.((.(((((((..........))))))))).))).))))).)).)))))))))..)))...............

Structure

---------------   uc  uu       -  C    A U   U  C       aaug 
               ggc  gu  acaguuA GG AGUG G UGA AG GCCCUGA    g
               |||  ||  ||||||| || |||| | ||| || |||||||     
               ccg  ca  ugucagu cc ucac c acu uc cgggacu    a
cucucccagcuuauc   uu  --       a  a    - c   c  -       aaaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1490a

• Accession: MIMAT0006042
• Description: Oikopleura dioica odi-miR-1490a mature miRNA
• Sequence: 16 - AGGCAGUGAGUUGAUAGCGCCCUGA - 40
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080