miRBase entry: odi-mir-1496

Stem-loop odi-mir-1496


Accession
MI0007109
Description
Oikopleura dioica odi-mir-1496 precursor miRNA


Sequence

caggcagcgauuugaUAGCAGUGAGAGUUUAGCAUUCGCAACauuuuuuacuguugcgaugcugcuaacugcuuuugaguuacugucacuaucgacgacggauaacu
..(((((.(((((((.((((((.((....((((((.(((((((........))))))))))))))).)))))).))))))).)))))..((((.......))))...

Structure
------------------ca     c       U      G  AGUU      U       uuu 
                    ggcag gauuuga AGCAGU AG    UAGCAU CGCAACa   u
                    ||||| ||||||| |||||| ||    |||||| |||||||    
                    cuguc uugaguu ucguca uc    gucgua gcguugu   u
ucaauaggcagcagcuauca     a       u      a  ----      -       cau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature odi-miR-1496

Accession MIMAT0006049
Description Oikopleura dioica odi-miR-1496 mature miRNA
Sequence 16 - UAGCAGUGAGAGUUUAGCAUUCGCAAC - 42
Evidence experimental
cloned [1]

References

  1. PubMed ID: 18339653
    Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
    "Fu X, Adamski M, Thompson EM"
    "Mol Biol Evol (2008) 25:1067-1080