miRBase entry: odi-mir-1497a

Stem-loop odi-mir-1497a


Accession
MI0007110
Description
Oikopleura dioica odi-mir-1497a precursor miRNA
Gene family
MIPF0000458; mir-1497


Sequence

ucgagagucucuagcuuuugcgaauccgcuuccucagugcuuccauaaguuuaaguucacgcuuaUUGAAGAACUGCAGGUGGUGGAUuuacucuugcaauaa
.(((((((.....((....))(((((((((.(((((((.((((.((((((..........)))))).)))).)))).))).))))))))))))))))......

Structure
-----u       cucuagcuuuugc         u   -    g    c      uuaa 
      cgagagu             gaauccgcu ccu cagu cuuc auaagu    g
      |||||||             ||||||||| ||| |||| |||| ||||||     
      guucuca             uuUAGGUGG GGA GUCA GAAG Uauucg    u
aauaac       -------------         U   C    A    U      cacu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature odi-miR-1497a

Accession MIMAT0006050
Description Oikopleura dioica odi-miR-1497a mature miRNA
Sequence 66 - UUGAAGAACUGCAGGUGGUGGAU - 88
Evidence experimental
cloned [1]

References

  1. PubMed ID: 18339653
    Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
    "Fu X, Adamski M, Thompson EM"
    "Mol Biol Evol (2008) 25:1067-1080