miRBase entry: odi-mir-1497f-1

Stem-loop odi-mir-1497f-1


Accession
MI0007116
Description
Oikopleura dioica odi-mir-1497f-1 precursor miRNA
Gene family
MIPF0000458; mir-1497


Sequence

aacuaaaacaaaggccuagacccugaccaccuuucuuuucuuggaaaacuuauagaguuaagcuuUUGAAGAAUUGCAGGUGGUAGGGggucuacgcugauug
........(((.(((.((((((((.(((((((..(..(((((.((((.((((......)))).)))).)))))..).)))))))..)))))))).)))..)))

Structure
aacuaaaa   -a   c        -g       uu uu     g    a    ua 
        caa  ggc uagacccu  accaccu  c  uucuu gaaa cuua  g
        |||  ||| ||||||||  |||||||  |  ||||| |||| ||||   
        guu  ucg aucuggGG  UGGUGGA  G  AAGAA UUuu gaau  a
--------   ag   c        GA       -C UU     G    c    ug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature odi-miR-1497f

Accession MIMAT0006055
Description Oikopleura dioica odi-miR-1497f mature miRNA
Sequence 66 - UUGAAGAAUUGCAGGUGGUAGGG - 88
Evidence not_experimental

References

  1. PubMed ID: 18339653
    Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
    "Fu X, Adamski M, Thompson EM"
    "Mol Biol Evol (2008) 25:1067-1080