miRBase entry: odi-mir-1497f-2

Stem-loop odi-mir-1497f-2


Accession
MI0007117
Description
Oikopleura dioica odi-mir-1497f-2 precursor miRNA
Gene family
MIPF0000458; mir-1497


Sequence

uuguuaaauccuucuggaccucaaacaccuugcuuuucuugagaaacucgaguaaaaaugagcuuUUGAAGAAUUGCAGGUGGUAGGGgccagggaaacaauc
(((((...(((..((((.((((...(((((.((..(((((.((((.((((........)))).)))).)))))..)))))))...))))))))))))))))..

Structure
--     aaa   uu    a    aaa     u  uu     g    a    agu 
  uuguu   ucc  cugg ccuc   caccu gc  uucuu agaa cucg   a
  |||||   |||  |||| ||||   ||||| ||  ||||| |||| ||||    
  aacaa   agg  gacc gGGG   GUGGA CG  AAGAA UUuu gagu   a
cu     ---   --    -    AUG     -  UU     G    c    aaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature odi-miR-1497f

Accession MIMAT0006055
Description Oikopleura dioica odi-miR-1497f mature miRNA
Sequence 66 - UUGAAGAAUUGCAGGUGGUAGGG - 88
Evidence not_experimental

References

  1. PubMed ID: 18339653
    Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
    "Fu X, Adamski M, Thompson EM"
    "Mol Biol Evol (2008) 25:1067-1080