miRBase entry: odi-mir-1498

Stem-loop odi-mir-1498


Accession
MI0007120
Description
Oikopleura dioica odi-mir-1498 precursor miRNA


Sequence

cuggcgauuuugcgaAGGAAUGUAGAAUUAGGAAUUCGGauagcuguuuauaaauagaugcuuucgaauuucaauuuucauucucccgcaaggucagccacaga
.(((((((((((((..((((((.((((((.((((((((((.(((.(((((....))))))))))))))))))))))))))))))..))))))))).))))....

Structure
---c    -         aA      U      A          u   u     u 
    uggc gauuuugcg  GGAAUG AGAAUU GGAAUUCGGa agc guuua a
    |||| |||||||||  |||||| |||||| |||||||||| ||| |||||  
    accg cuggaacgc  ucuuac uuuuaa cuuuaagcuu ucg uagau a
agac    a         cc      -      -          -   -     a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature odi-miR-1498

Accession MIMAT0006058
Description Oikopleura dioica odi-miR-1498 mature miRNA
Sequence 16 - AGGAAUGUAGAAUUAGGAAUUCGG - 39
Evidence experimental
cloned [1]

References

  1. PubMed ID: 18339653
    Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
    "Fu X, Adamski M, Thompson EM"
    "Mol Biol Evol (2008) 25:1067-1080