miRBase entry: odi-mir-1503

Stem-loop odi-mir-1503


Accession
MI0007125
Description
Oikopleura dioica odi-mir-1503 precursor miRNA


Sequence

cucagguagaauccucugaucgaugggcgguagugacgauuucuuuuuagggcgcagaagaguccCGAGGAAGAUCUUGUGGCAAucaauaaaaucuugg
.(((((........))))).........(((.((.((((..(((((((.((((........))))..)))))))..)))).)).))).............

Structure
cucagguagaauccucugaucgaugggc   a  g    uu       -a    gca 
                            ggu gu acga  ucuuuuu  gggc   g
                            ||| || ||||  |||||||  ||||    
                            cuA CG UGUU  AGAAGGA  ccug   a
---------------gguucuaaaauaa   A  G    CU       GC    aga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature odi-miR-1503

Accession MIMAT0006063
Description Oikopleura dioica odi-miR-1503 mature miRNA
Sequence 66 - CGAGGAAGAUCUUGUGGCAA - 85
Evidence experimental
cloned [1]

References

  1. PubMed ID: 18339653
    Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
    "Fu X, Adamski M, Thompson EM"
    "Mol Biol Evol (2008) 25:1067-1080