Stem-loop odi-mir-1c

Accession

MI0007135

Description

Oikopleura dioica odi-mir-1c precursor miRNA

Gene family

MIPF0000038; mir-1

Sequence

ugacauggcagccacgguuuacguacucauuuacauucuuuaagacgcugguuuuaauuuccuuaUGGAAUGUAAAGAAGUAUGUGAaagugggaugcccuu
......((((.((((..((((((((((..(((((((((((((((((....))))))).........))))))))))..)))))))))).))))..))))...

Structure

ugacau    -g    gg          ca          ---------       g 
      ggca  ccac  uuuacguacu  uuuacauucu         uuaagac c
      ||||  ||||  ||||||||||  ||||||||||         |||||||  
      ccgu  ggug  aAGUGUAUGA  AAAUGUAAGG         aauuuug u
---uuc    ag    -a          AG          Uauuccuuu       g 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-1c

• Accession: MIMAT0006073
• Description: Oikopleura dioica odi-miR-1c mature miRNA
• Sequence: 66 - UGGAAUGUAAAGAAGUAUGUGA - 87
• Evidence: not_experimental

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080