Stem-loop odi-mir-7-1

Accession

MI0007140

Description

Oikopleura dioica odi-mir-7-1 precursor miRNA

Gene family

MIPF0000022; mir-7

Sequence

aucugguugacgguuUGGAAGACUAGUGAUUUUGUUGacuuggacauaauugucguuucuugucaacucacacuaguuucccguacugcaucggauucaauc
(((((((.(.((((.(((.(((((((((.....((((((..(((((....))))....)..))))))...))))))))).))).))))))))))))......

Structure

------       u a    u   A         AUUUU      uu ----    u 
      aucuggu g cggu UGG AGACUAGUG     GUUGac  g    gaca a
      ||||||| | |||| ||| |||||||||     ||||||  |    ||||  
      uaggcua c guca gcc uuugaucac     caacug  c    cugu a
cuaacu       - -    u   c         --acu      uu uuug    u 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-7

• Accession: MIMAT0006078
• Description: Oikopleura dioica odi-miR-7 mature miRNA
• Sequence: 16 - UGGAAGACUAGUGAUUUUGUUG - 37
• Evidence: not_experimental

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080