Stem-loop odi-mir-219

Accession

MI0007147

Description

Oikopleura dioica odi-mir-219 precursor miRNA

Sequence

gagugaaauauucggUGAUUGUCCAAACGCAAUUAGuagacgaaagagaaacggauugacguuuggccaaucggccuaaaauacucugcagucgacgguaa
((.((...((((.((((((((.((((((((((((.((.............)).))))).))))))).))))).)))...)))).....)).))........

Structure

--------  g  --aaa    --c   -     U       -     A  agacg 
        ga ug     uauu   ggU GAUUG CCAAACG CAAUU Gu     a
        || ||     ||||   ||| ||||| ||||||| ||||| ||     a
        cu ac     auaa   ccg cuaac gguuugc guuag ca     a
aauggcag  g  gucuc    aau   g     c       a     g  aagag 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-219

• Accession: MIMAT0006084
• Description: Oikopleura dioica odi-miR-219 mature miRNA
• Sequence: 16 - UGAUUGUCCAAACGCAAUUAG - 36
• Evidence: not_experimental

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080