Stem-loop odi-mir-281

Accession

MI0007148

Description

Oikopleura dioica odi-mir-281 precursor miRNA

Gene family

MIPF0000087; mir-46

Sequence

uucauuuaucaaggcugaaagcaaaaaggaggcaaaguucaugauugucgaaagacaaggaauacUGUCAUGGAAUUGCUCUCUUGaugcucuuugcaaac
.............((.((.((((...(((((((((..((((((((((((....)))).........)))))))).)))).)))))..)))).)).))....

Structure

uucauuuaucaag  u  a    aaa     -    ag        ---------    g 
             gc ga agca   aggag gcaa  uucaugau         uguc a
             || || ||||   ||||| ||||  ||||||||         ||||  
             cg uu ucgu   UUCUC CGUU  AGGUACUG         acag a
---------caaa  u  c    -aG     U    -A        Ucauaagga    a 

Annotation confidence Not enough data

Genome context

Unknown

Mature odi-miR-281

• Accession: MIMAT0006085
• Description: Oikopleura dioica odi-miR-281 mature miRNA
• Sequence: 66 - UGUCAUGGAAUUGCUCUCUUG - 86
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080