miRBase entry: cin-mir-181

Stem-loop cin-mir-181


Accession
MI0007171
Description
Ciona intestinalis cin-mir-181 precursor miRNA


Sequence

agauguuuguguaauAACAUUCAACCUGUCGAGCAAGccugcuuaacuagucguuguuauuuuugaccucgcuacugcagauguuggacauguuugguguaaguaacaauguug
......((((......(((((.(((.((((.((((...((((.....(((.((..((((....))))..)))))..)))).)))).)))).))).))))).....)))).....

Structure
agaugu    guaauA     C   C    G    AGc    uuaac   u  uu    u 
      uugu      ACAUU AAC UGUC AGCA   cugc     uag cg  guua u
      ||||      ||||| ||| |||| ||||   ||||     ||| ||  ||||  
      aaca      ugugg uug acag uugu   gacg     auc gc  cagu u
-guugu    -augaa     u   u    g    --a    ---uc   -  uc    u 


Annotation confidence Not enough data
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Genome context
3q: 1843689-1843802 [+]

Database links

Mature cin-miR-181

Accession MIMAT0006106
Description Ciona intestinalis cin-miR-181 mature miRNA
Sequence 16 - AACAUUCAACCUGUCGAGCAAG - 37
Evidence not_experimental

References

  1. PubMed ID: 18339653
    Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
    "Fu X, Adamski M, Thompson EM"
    "Mol Biol Evol (2008) 25:1067-1080