miRBase entry: cin-mir-672

Stem-loop cin-mir-672


Accession
MI0007180
Description
Ciona intestinalis cin-mir-672 precursor miRNA


Sequence

acauugauggagauaUGAGUUUGGUGUACUGUGUGUUgcaugucgucaagcauccaauggcucgacuugcccgacaucccacaacggguucaugguuucaa
.......(((((.((((((((((.(((...((((...(((.((((...(((........))))))).)))...))))...))).)))))))))).))))).

Structure
acauuga     a          G   ACU    GUU   u    uca   auc 
       uggag uaUGAGUUUG UGU   GUGU   gca gucg   agc   c
       ||||| |||||||||| |||   ||||   ||| ||||   |||    
       acuuu guacuugggc aca   uaca   cgu cagc   ucg   a
------a     g          a   ccc    gcc   u    ---   gua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cin-miR-672

Accession MIMAT0006115
Description Ciona intestinalis cin-miR-672 mature miRNA
Sequence 16 - UGAGUUUGGUGUACUGUGUGUU - 37
Evidence not_experimental

References

  1. PubMed ID: 18339653
    Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
    "Fu X, Adamski M, Thompson EM"
    "Mol Biol Evol (2008) 25:1067-1080