Stem-loop csa-mir-153

Accession

MI0007197

Description

Ciona savignyi csa-mir-153 precursor miRNA

Gene family

MIPF0000050; mir-153

Sequence

ggaaaacauugucuuuacuguucacgagugucauuuuaauacuaugcagcuuugaauaauguuagUUGCAUAGUAAUAAAAGUGAUCaugcguuuacaagaa
..................(((..(((.((((((((((..((((((((((((............))))))))))))...))))))).))).)))..)))....

Structure

ggaaaacauugucuuuac   uc   a   -       -aa            uugaa 
                  ugu  acg gug ucauuuu   uacuaugcagcu     u
                  |||  ||| ||| |||||||   ||||||||||||      
                  aca  ugc uaC AGUGAAA   AUGAUACGUUga     a
--------------aaga   uu   g   U       AUA            uugua 

Annotation confidence Not enough data

Genome context

reftig_48: 2357835-2357936 [-]

Mature csa-miR-153

• Accession: MIMAT0006130
• Description: Ciona savignyi csa-miR-153 mature miRNA
• Sequence: 66 - UUGCAUAGUAAUAAAAGUGAUC - 87
• Evidence: not_experimental

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080