miRNA Entry for MI0007198

Stem-loop sequence csa-mir-155

Accession

MI0007198

Description

Ciona savignyi miR-155 stem-loop

Stem-loop

uagcuaa     cu  ucuu   gacgu     auaa   ac    a   cggg      - a    ---g     g 
       uugua  ac    acu     gucac    uua  agca uua    acggau c cuga    cugua u
       |||||  ||    |||     |||||    |||  |||| |||    |||||| | ||||    |||||  
       aacau  ug    ugg     uagug    aau  ucgu aau    ugucua g gacu    gacau g
------a     cu  -cuu   -uauu     ----   aa    -   -uaa      c c    gaaa     a

Get sequence

Genome context

Coordinates (CSAV2.0)	Overlapping transcripts
reftig_1: 133886-134023 [-]	sense ENSCSAVT00000002620 ; intron 1 ENSCSAVT00000002621 ; intron 1 ENSCSAVT00000002620 ; intron 1 ENSCSAVT00000002621 ; intron 1 ENSCSAVT00000002620 ; intron 1 ENSCSAVT00000002621 ; intron 1

Mature sequence csa-miR-155
Accession	MIMAT0006131
Sequence	101 - uuaaugcuaauaagugauuuaug - 123 Get sequence
Evidence	not experimental

References
1	PMID:18339653 "Altered miRNA repertoire in the simplified chordate, Oikopleura dioica" Fu X, Adamski M, Thompson EM Mol Biol Evol. 25:1067-1080(2008).

miRBase

Stem-loop sequence csa-mir-155

Mature sequence csa-miR-155

References