miRBase entry: gma-MIR1512a

Stem-loop gma-MIR1512a


Accession
MI0007224
Description
Glycine max gma-MIR1512a precursor miRNA
Gene family
MIPF0001291; MIR1512

Literature search
11 open access papers mention gma-MIR1512a
(25 sentences)

Sequence

ucuugauuccUAACUGAAAAUUCUUAAAGUAUucccaucaucgaaaugaaaugaagauugggaauGCUUUAAGAAUUUCAGUUAUGcaucaauca
..(((((.(.(((((((((.(((((((((((((((((((.(((........))).)).)))))))))))))))))))))))))).).)))))...

Structure
-uc     u c         A                 -  a   aaa 
   uugau c UAACUGAAA UUCUUAAAGUAUuccca uc ucg   u
   ||||| | ||||||||| ||||||||||||||||| || |||    
   aacua G AUUGACUUU AAGAAUUUCGuaagggu ag agu   g
acu     c U         -                 u  a   aaa 


Annotation confidence Not enough data
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Genome context
chr18: 56521611-56521705 [+]

Database links

Mature gma-miR1512a-5p

Accession MIMAT0007370
Description Glycine max gma-miR1512a-5p mature miRNA
Sequence 11 - UAACUGAAAAUUCUUAAAGUAU - 32
Evidence experimental
454 [1]

Mature gma-miR1512a-3p

Accession MIMAT0032030
Description Glycine max gma-miR1512a-3p mature miRNA
Sequence 66 - GCUUUAAGAAUUUCAGUUAUG - 86
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18402695
    Novel and nodulation-regulated microRNAs in soybean roots
    Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O
    BMC Genomics (2008) 9:160

  2. PubMed ID: 24475082
    Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
    Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
    PLoS One (2014) 9:e86153