miRBase entry: gma-MIR1532

Stem-loop gma-MIR1532


Accession
MI0007251
Description
Glycine max gma-MIR1532 precursor miRNA


Sequence

ucaacucauucucucgcguagcguguagcgcgugcuaaacgagacguuaagcacgagagucagaauccguuacucgcgcacagcgcacagcacagacuaaguggacaaaacugacacagAACACGCUAAGCGAGAGGAGCUCgcuaagcaca
........(((((((((.((((((((..(.((((((.((((...)))).)))))).).(((((..(((((((.((((((...))))........)).))).)))).....))))).....)))))))).)))))))))..............

Structure
------ucaacuca         g        agcgcgugcuaaacgagacguuaagcacgaga     ---aa    -   c  --------    a 
              uucucucgc uagcgugu                                gucag     uccg uua uc        gcgc  
              ||||||||| ||||||||                                |||||     |||| ||| ||        |||| c
              AGGAGAGCG AUCGCACA                                caguc     aggu aau ag        cgcg  
acacgaaucgCUCG         A        ---------------------------Agaca     aaaac    g   c  acacgaca    a 


Annotation confidence Not enough data
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Genome context
chr13: 43766192-43766343 [+]

Database links

Mature gma-miR1532

Accession MIMAT0007394
Description Glycine max gma-miR1532 mature miRNA
Sequence 120 - AACACGCUAAGCGAGAGGAGCUC - 142
Evidence experimental
454 [1]

References

  1. PubMed ID: 18402695
    Novel and nodulation-regulated microRNAs in soybean roots
    Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O
    BMC Genomics (2008) 9:160