miRBase entry: gga-mir-1583

Stem-loop gga-mir-1583


Accession
MI0007309
Description
Gallus gallus gga-mir-1583 precursor miRNA


Sequence

9 reads, 0 reads per million, 4 experiments
ucgcugggcggagggcgcgggucgccuuccgucccgcggcucucgggcggcCGUAGGGCCGUGGGACGGCAgcuccgagccgugcgccgugccggcgg
.((((((((((...((((((.(((.((.((((((((((((((((((....))).))))))))))))))).))...))).)))))).)))).)))))).

Structure
u      -    agg      g   --c  u               -   g 
 cgcugg gcgg   gcgcgg ucg   cu ccgucccgcggcucu cgg c
 |||||| ||||   |||||| |||   || ||||||||||||||| |||  
 gcggcc ugcc   cgugcc agc   gA GGCAGGGUGCCGGGA GCc g
g      g    --g      g   cuc  C               U   g 


Annotation confidence Not enough data
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Genome context
chrZ: 70734341-70734438 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from gga-mir-1583
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gga-miR-1583

Accession MIMAT0007444
Description Gallus gallus gga-miR-1583 mature miRNA
Sequence 52 - CGUAGGGCCGUGGGACGGCA - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964