miRBase entry: gga-mir-1589

Stem-loop gga-mir-1589


Accession
MI0007316
Description
Gallus gallus gga-mir-1589 precursor miRNA


Sequence

gcagugugcagagaggacacucugacagaggcaccgcugcccagCAGCCUCUGCUGAUCGUCUUUUccuuccaaucugc
((((..((..((((((((..((.(.(((((((...(((....))).)))))))).))..))))))))....))..))))

Structure
    ug  --ca        ac  u a       acc   g 
gcag  ug    gagaggac  uc g cagaggc   gcu c
||||  ||    ||||||||  || | |||||||   |||  
cguc  ac    cUUUUCUG  AG C GUCUCCG   Cga c
    ua  cuuc        CU  U -       --A   c 


Annotation confidence Not enough data
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Genome context
chr8: 16516612-16516690 [-]

Database links

Mature gga-miR-1589

Accession MIMAT0007451
Description Gallus gallus gga-miR-1589 mature miRNA
Sequence 45 - CAGCCUCUGCUGAUCGUCUUUU - 66
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964