miRBase entry: gga-mir-1602

Stem-loop gga-mir-1602


Accession
MI0007329
Description
Gallus gallus gga-mir-1602 precursor miRNA

Literature search
1 open access papers mention gga-mir-1602
(4 sentences)

Sequence

6 reads, 0 reads per million, 1 experiments
ggagcaggaggagaugcccugggggugcugcgaagccugcagccgcccaggggcugagcUGGGCUCUGCAUCACCCCAUGGgcacugcucc
(((((((.......(((((..((((((.((((.(((((((((((.(...).)))))...)))))).)))).))))))..))))))))))))

Structure
       gaggaga     ug      c    a      ---     g c 
ggagcag       ugccc  ggggug ugcg agccug   cagcc c  
|||||||       |||||  |||||| |||| ||||||   ||||| | c
ccucguc       acgGG  CCCCAC ACGU UCGGGU   gucgg g  
       -------     UA      U    C      cga     g a 


Annotation confidence Not enough data
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Genome context
chr4: 76824300-76824390 [+]

Database links

Mature gga-miR-1602

Accession MIMAT0007468
Description Gallus gallus gga-miR-1602 mature miRNA
Sequence 60 - UGGGCUCUGCAUCACCCCAUGG - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964