miRBase entry: gga-mir-1618

Stem-loop gga-mir-1618


Accession
MI0007347
Description
Gallus gallus gga-mir-1618 precursor miRNA

Literature search
1 open access papers mention gga-mir-1618
(1 sentences)

Sequence

27 reads, 2 reads per million, 2 experiments
cugcgugcUGCAUCCUGGCUCCUGGCGUCCugcacgugcuauuggaGAGCCCGGAGCCAGGCUGCUGUucuccaggcag
((((.(((.(((.(((((((((.(((.(((.((....))....)))..))).))))))))).))).).....)).))))

Structure
    g  ----- U   U         U   -G   ---u  a 
cugc ug     c GCA CCUGGCUCC GGC  UCC    gc c
|||| ||     | ||| ||||||||| |||  |||    ||  
gacg ac     G CGU GGACCGAGG CCG  agg    cg g
    g  cucuU U   C         C   AG   uuau  u 


Annotation confidence Not enough data
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Genome context
chr8: 7465626-7465704 [+]

Database links

Mature gga-miR-1618-3p

Accession MIMAT0007485
Description Gallus gallus gga-miR-1618-3p mature miRNA
Sequence 47 - GAGCCCGGAGCCAGGCUGCUGU - 68
Evidence experimental
Illumina [1-2]

Mature gga-miR-1618-5p

Accession MIMAT0026776
Description Gallus gallus gga-miR-1618-5p mature miRNA
Sequence 9 - UGCAUCCUGGCUCCUGGCGUCC - 30
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45