miRBase entry: gga-mir-1622

Stem-loop gga-mir-1622


Accession
MI0007351
Description
Gallus gallus gga-mir-1622 precursor miRNA


Sequence

gagcaggcauauggcagaguuagaucucucuugugagcgugugaugcaugacuaCACAUAUGAUGAGUACUGAUGagacgugccacaugugcacauc
......((((((((((..(((((..(((((.(((((((((((...))))).)).))))...)).)))..)))))......)))))..))))).....

Structure
gagcag     --     ----ga     au   -  --u    -  -     g 
      gcaua  uggca      guuag  cuc uc   ugug ag cgugu  
      |||||  |||||      |||||  ||| ||   |||| || ||||| a
      cgugu  accgu      UAGUC  GAG AG   ACAC uc guacg  
-cuaca     ac     gcagaG     AU   U  UAU    a  a     u 


Annotation confidence Not enough data
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Genome context
chr2: 40348948-40349044 [-]

Database links

Mature gga-miR-1622

Accession MIMAT0007490
Description Gallus gallus gga-miR-1622 mature miRNA
Sequence 55 - CACAUAUGAUGAGUACUGAUG - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964