Stem-loop gga-mir-1677

Accession

MI0007411

Description

Gallus gallus gga-mir-1677 precursor miRNA mir-1677

Gene
family

RF04254; mir-1677

Literature search

4 open access papers mention gga-mir-1677
(7 sentences)

Sequence

34330 reads, 20.0 reads per million, 216 experiments

agggucugaUCCUGCACCGCUGAAGUCAAUGgaaguuuugucaUUGACUUCAGUAGGAGCAGGAUUugaaccu
(((.((.((((((((.((((((((((((((((........)))))))))))))).)).)))))))).)).)))

Structure

   g  u        A  -              aag 
agg uc gaUCCUGC CC GCUGAAGUCAAUGg   u
||| || |||||||| || ||||||||||||||    
ucc ag UUAGGACG GG UGACUUCAGUUacu   u
   a  u        A  A              guu 

Annotation confidence High

Genome context

3: 73659006-73659078 [+]

Mature gga-miR-1677-5p

• Accession: MIMAT0007562
• Description: Gallus gallus gga-miR-1677-5p mature miRNA
• Sequence: 10 - UCCUGCACCGCUGAAGUCAAUG - 31
• Evidence: experimental ; Illumina [1]

Mature gga-miR-1677-3p

• Accession: MIMAT0007563
• Description: Gallus gallus gga-miR-1677-3p mature miRNA
• Sequence: 44 - UUGACUUCAGUAGGAGCAGGAUU - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964