miRBase entry: gga-mir-1689

Stem-loop gga-mir-1689


Accession
MI0007423
Description
Gallus gallus gga-mir-1689 precursor miRNA

Literature search
1 open access papers mention gga-mir-1689
(6 sentences)

Sequence

11 reads, 0 reads per million, 3 experiments
gguguuaugucugggcagaagaUCUCUGCUUACAGUGUCUGGGGggaucaugcggcagccCCGGUGACUGGAAGCAGCGUUGAcuucugggcaguucugucucc
((.(......(((..((((((..(.(((((..((((..((((((...((....))...))))))..))))..))))).)....))))))..)))......).))

Structure
  u uuaugu   gg      --aU U     UA    GU      gga  a 
gg g      cug  cagaag    C CUGCU  CAGU  CUGGGG   uc u
|| |      |||  ||||||    | |||||  ||||  ||||||   ||  
cc c      gac  gucuuc    G GACGA  GUCA  GGCCcc   gg g
  u ugucuu   gg      AGUU C     AG    GU      gac  c 


Annotation confidence Not enough data
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Genome context
chr19: 9416330-9416433 [-]

Database links

Mature gga-miR-1689-5p

Accession MIMAT0007579
Description Gallus gallus gga-miR-1689-5p mature miRNA
Sequence 23 - UCUCUGCUUACAGUGUCUGGGG - 44
Evidence experimental
Illumina [1]

Mature gga-miR-1689-3p

Accession MIMAT0007580
Description Gallus gallus gga-miR-1689-3p mature miRNA
Sequence 61 - CCGGUGACUGGAAGCAGCGUUGA - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964