miRBase entry: gga-mir-1690

Stem-loop gga-mir-1690


Accession
MI0007424
Description
Gallus gallus gga-mir-1690 precursor miRNA


Sequence

15 reads, 1 reads per million, 2 experiments
gauggcuuccagcagggugcguaUCCAGAGGCAAAGGAGCACUGCUgcuaaaugggacacggcagagcugcuuucucugugaugaugcacucugcguagucauu
(((((((....((((((((((((((((((((..(((.(((.((((((............)))))).))).))))))))).))).)))))))))))..)))))))

Structure
       ucca           -   -      CA   G   A      cuaaa 
gauggcu    gcagggugcgu aUC CAGAGG  AAG AGC CUGCUg     u
|||||||    ||||||||||| ||| ||||||  ||| ||| ||||||      
uuacuga    cgucucacgua uag gucucu  uuc ucg gacggc     g
       --ug           g   u      --   g   a      acagg 


Annotation confidence Not enough data
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Genome context
chr1: 83828701-83828804 [+]

Database links

Mature gga-miR-1690-5p

Accession MIMAT0007581
Description Gallus gallus gga-miR-1690-5p mature miRNA
Sequence 24 - UCCAGAGGCAAAGGAGCACUGCU - 46
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964