miRBase entry: gga-mir-1781

Stem-loop gga-mir-1781


Accession
MI0007524
Description
Gallus gallus gga-mir-1781 precursor miRNA
Gene family
MIPF0001583; mir-1781


Sequence

925 reads, 15 reads per million, 5 experiments
ggagacaaggagcguguuuAACAGCUGAGUGAUUUAAAGCAaucaaauuccuuuggcUUUAAAUCAUGCAGCUGUUGAacaagcucuugcuuc
((((.((((.(((.(((((((((((((.((((((((((((...((((....)))))))))))))))).))))))))))))).)))))))))))

Structure
    a    g   g             A            Aau    u 
ggag caag agc uguuuAACAGCUG GUGAUUUAAAGC   caaa u
|||| |||| ||| ||||||||||||| ||||||||||||   ||||  
cuuc guuc ucg acaAGUUGUCGAC UACUAAAUUUcg   guuu c
    -    -   a             G            ---    c 


Annotation confidence Not enough data
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Genome context
chr14: 3325512-3325604 [-]

Database links

Mature gga-miR-1781-5p

Accession MIMAT0007692
Description Gallus gallus gga-miR-1781-5p mature miRNA
Sequence 20 - AACAGCUGAGUGAUUUAAAGCA - 41
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature gga-miR-1781-3p

Accession MIMAT0007693
Description Gallus gallus gga-miR-1781-3p mature miRNA
Sequence 58 - UUUAAAUCAUGCAGCUGUUGA - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964