Stem-loop gga-mir-1811

Accession

MI0007556

Description

Gallus gallus gga-mir-1811 precursor miRNA

Literature search

1 open access papers mention gga-mir-1811
(2 sentences)

Sequence

gcugacaugguuUAUUGCAGCGCUGGGUGCAUggagaucuucacuuagcgugcacccagcgcugaaauaaccaauguuggc
((((((((((((.(((.((((((((((((((((..((.......))..)))))))))))))))).))))))).))))))))

Structure

        -    U   G                ga  uc 
gcugacau gguu AUU CAGCGCUGGGUGCAUg  ga  u
|||||||| |||| ||| ||||||||||||||||  ||  u
cgguugua ccaa uaa gucgcgacccacgugc  uu  c
        a    -   a                ga  ca 

Annotation confidence Not enough data

Genome context

chr4: 57456663-57456743 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from gga-mir-1811

Mature gga-miR-1811

• Accession: MIMAT0007729
• Description: Gallus gallus gga-miR-1811 mature miRNA
• Sequence: 13 - UAUUGCAGCGCUGGGUGCAU - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18469162
   A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
   "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
   "Genome Res (2008) 18:957-964