Stem-loop mml-mir-1-2

Accession

MI0007569

Description

Macaca mulatta mml-mir-1-2 precursor miRNA

Gene family

MIPF0000038; mir-1

Literature search

3 open access papers mention mml-mir-1-2
(77 sentences)

Sequence

9145532 reads, 45886 reads per million, 9 experiments

cagaguACAUACUUCUUUAUGUACCCAUAugaacauacaaugcuaUGGAAUGUAAAGAAGUAUGUAUuuuug
.(((((((((((((((((((((..(((((..(........)..))))).)))))))))))))))))))))..

Structure

-c                     AC     ug aca 
  agaguACAUACUUCUUUAUGU  CCAUA  a   u
  |||||||||||||||||||||  |||||  |    
  uuuUAUGUAUGAAGAAAUGUA  GGUau  u   a
gu                     -A     cg aac 

Annotation confidence Not enough data

Genome context

chr18: 10284217-10284288 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-1-2

Mature mml-miR-1-3p

• Accession: MIMAT0006150
• Description: Macaca mulatta mml-miR-1-3p mature miRNA
• Sequence: 46 - UGGAAUGUAAAGAAGUAUGUAU - 67
• Evidence: experimental ; Illumina [2]

Mature mml-miR-1-2-5p

• Accession: MIMAT0031099
• Description: Macaca mulatta mml-miR-1-2-5p mature miRNA
• Sequence: 7 - ACAUACUUCUUUAUGUACCCAUA - 29
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45