miRBase entry: mml-mir-27b

Stem-loop mml-mir-27b


Accession
MI0007595
Description
Macaca mulatta mml-mir-27b precursor miRNA
Gene family
MIPF0000036; mir-27


Sequence

639365 reads, 4068 reads per million, 9 experiments
accucucuaacaaggugcAGAGCUUAGCUGAUUGGUGAACAgugauugguuuccgcuuugUUCACAGUGGCUAAGUUCUGCaccugaagagaaggug
((((((((....(((((((((((((((((.((((.(((((((....(((...)))..))))))))))))))))))))))))))))..)))).)))).

Structure
-    -    aaca                 G    G       ugau   u 
 accu cucu    aggugcAGAGCUUAGCU AUUG UGAACAg    ugg  
 |||| ||||    ||||||||||||||||| |||| |||||||    ||| u
 ugga gaga    uccaCGUCUUGAAUCGG UGAC ACUUguu    gcc  
g    a    --ag                 -    -       --uc   u 


Annotation confidence High
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Genome context
chr15: 108904304-108904400 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mml-mir-27b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-27b-3p

Accession MIMAT0006167
Description Macaca mulatta mml-miR-27b-3p mature miRNA
Sequence 61 - UUCACAGUGGCUAAGUUCUGC - 81
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-miR-27b-5p

Accession MIMAT0026802
Description Macaca mulatta mml-miR-27b-5p mature miRNA
Sequence 19 - AGAGCUUAGCUGAUUGGUGAACA - 41
Evidence experimental
Illumina [2]
Database links
Predicted targets

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45