miRBase entry: mml-mir-130b

Stem-loop mml-mir-130b


Accession
MI0007619
Description
Macaca mulatta mml-mir-130b precursor miRNA
Gene family
MIPF0000034; mir-130


Sequence

3547 reads, 51 reads per million, 9 experiments
ggccugcccgacACUCUUUCCCUGUUGCACUACUgugggccacugggaagCAGUGCAAUGAUGAAAGGGCAUcggucagguc
((((((.((((..(((((((..(((((((((.((..((....))....)).)))))))))..)))))))..)))).))))))

Structure
      c    cA       CC         A  --gu  g 
ggccug ccga  CUCUUUC  UGUUGCACU CU    gg c
|||||| ||||  |||||||  ||||||||| ||    ||  
cuggac ggcU  GGGAAAG  GUAACGUGA ga    uc c
      u    AC       UA         C  aggg  a 


Annotation confidence High
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Genome context
chr10: 63150659-63150740 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mml-mir-130b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-130b-3p

Accession MIMAT0006187
Description Macaca mulatta mml-miR-130b-3p mature miRNA
Sequence 51 - CAGUGCAAUGAUGAAAGGGCAU - 72
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-miR-130b-5p

Accession MIMAT0026815
Description Macaca mulatta mml-miR-130b-5p mature miRNA
Sequence 13 - ACUCUUUCCCUGUUGCACUACU - 34
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45