miRBase entry: mml-mir-133c

Stem-loop mml-mir-133c


Accession
MI0007621
Description
Macaca mulatta mml-mir-133c precursor miRNA
Gene family
MIPF0000029; mir-133

Literature search
1 open access papers mention mml-mir-133c
(1 sentences)

Sequence

23586 reads, 190 reads per million, 9 experiments
gggagccaaaugcuuugcuagAGCUGGUAAAAUGGAACCAAAUcgacuguccaauggaUUUGGUCCCCUUCAACCAGCUGuagcugugcauugauggcgccg
.((.(((((((((...((((.(((((((..((.((.((((((((.(........).)))))))).)).))..))))))).))))...)))))..)))).)).

Structure
g  a    --     uuu    g       AA  U  A        g cug 
 gg gcca  aaugc   gcua AGCUGGU  AA GG ACCAAAUc a   u
 || ||||  |||||   |||| |||||||  || || |||||||| |    
 cc cggu  uuacg   cgau UCGACCA  UU CC UGGUUUag u   c
g  g    ag     ugu    G       AC  C  C        g aac 


Annotation confidence High
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Genome context
chr10: 1797012-1797113 [-]

Database links

Mature mml-miR-133c-3p

Accession MIMAT0006777
Description Macaca mulatta mml-miR-133c-3p mature miRNA
Sequence 59 - UUUGGUCCCCUUCAACCAGCUG - 80
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-miR-133c-5p

Accession MIMAT0026817
Description Macaca mulatta mml-miR-133c-5p mature miRNA
Sequence 22 - AGCUGGUAAAAUGGAACCAAAU - 43
Evidence experimental
Illumina [2]
Database links
Predicted targets

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45