Stem-loop mml-mir-133b

Accession

MI0007622

Description

Macaca mulatta mml-mir-133b precursor miRNA

Literature search

2 open access papers mention mml-mir-133b
(2 sentences)

Sequence

2611 reads, 17 reads per million, 8 experiments

ccucagaagaaagaugcccccugcucuggcUGGUCAAACGGAACCAAGUCcgucuuccugagaggUUUGGUCCCCUUCAACCAGCUAcagcagggcuggcaauucccaguccuuggaga
.(((.((.((..(((((((((((((.((((((((..((.((.((((((.((.((((...)))))))))))).)).))..)))))))).)))))))..))))..))....)).)).))).

Structure

c   a  a  --aa  --    --       c        CA  C  A      U  g    c 
 cuc ga ga    ga  ugcc  cccugcu uggcUGGU  AA GG ACCAAG Cc ucuu  
 ||| || ||    ||  ||||  ||||||| ||||||||  || || |||||| || |||| c
 gag uu cu    cu  acgg  gggacga AUCGACCA  UU CC UGGUUU gg agag  
a   g  c  gacc  ua    uc       c        AC  C  C      -  -    u 

Annotation confidence Not enough data

Genome context

chr4: 53110676-53110794 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-133b

Mature mml-miR-133b-3p

• Accession: MIMAT0006189
• Description: Macaca mulatta mml-miR-133b-3p mature miRNA
• Sequence: 66 - UUUGGUCCCCUUCAACCAGCUA - 87
• Evidence: experimental ; Illumina [2]

Mature mml-miR-133b-5p

• Accession: MIMAT0026818
• Description: Macaca mulatta mml-miR-133b-5p mature miRNA
• Sequence: 31 - UGGUCAAACGGAACCAAGUC - 50
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45