miRBase entry: mml-mir-135a-1

Stem-loop mml-mir-135a-1


Accession
MI0007624
Description
Macaca mulatta mml-mir-135a-1 precursor miRNA
Gene family
MIPF0000028; mir-135

Literature search
1 open access papers mention mml-mir-135a-1
(2 sentences)

Sequence

7119 reads, 74 reads per million, 9 experiments
aggccucgcuguucucUAUGGCUUUUUAUUCCUAUGUGAuucuacugcucacucAUAUAGGGAUUGGAGCCGUGGCgcacggcggggaca
...(((((((((.(.((((((((((..((((((((((((.............)))))))))))).)))))))))).).)))))))))...

Structure
agg         u u          UU            uucua 
   ccucgcugu c cUAUGGCUUU  AUUCCUAUGUGA     c
   ||||||||| | ||||||||||  ||||||||||||     u
   ggggcggca g GGUGCCGAGG  UAGGGAUAUAcu     g
aca         c C          -U            cacuc 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chr2: 89922641-89922730 [+]

Database links

Mature mml-miR-135a-5p

Accession MIMAT0002251
Description Macaca mulatta mml-miR-135a-5p mature miRNA
Sequence 17 - UAUGGCUUUUUAUUCCUAUGUGA - 39
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature mml-miR-135a-1-3p

Accession MIMAT0031029
Description Macaca mulatta mml-miR-135a-1-3p mature miRNA
Sequence 55 - AUAUAGGGAUUGGAGCCGUGGC - 76
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45