Stem-loop mml-mir-138

Accession

MI0007628

Description

Macaca mulatta mml-mir-138 precursor miRNA mir-138

Gene
family

RF00671; mir-138

Literature search

1 open access papers mention mml-mir-138
(1 sentences)

Sequence

76947 reads, 500 reads per million, 8 experiments

cguugcugcAGCUGGUGUUGUGAAUCAGGCCGacgagcagcgcauccucuuacccggcUAUUUCACGACACCAGGGUUgcauca
.(.(((.((..(((((((((((((...(((((..(((.((......)))))...)))))..))))))))))))).)).))).).

Structure

c u   u  AG             UCA     -ac   c  cg 
 g ugc gc  CUGGUGUUGUGAA   GGCCG   gag ag  c
 | ||| ||  |||||||||||||   |||||   ||| ||   
 c acg UG  GACCACAGCACUU   Ucggc   uuc uc  a
a u   U  -G             -UA     cca   -  cu 

Annotation confidence High

Genome context

chr20: 41029997-41030080 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-138

Mature mml-miR-138-5p

• Accession: MIMAT0006194
• Description: Macaca mulatta mml-miR-138-5p mature miRNA
• Sequence: 10 - AGCUGGUGUUGUGAAUCAGGCCG - 32
• Evidence: experimental ; Illumina [2]

Mature mml-miR-138-3p

• Accession: MIMAT0026822
• Description: Macaca mulatta mml-miR-138-3p mature miRNA
• Sequence: 59 - UAUUUCACGACACCAGGGUU - 78
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45