Stem-loop mml-mir-148b

Accession

MI0007639

Description

Macaca mulatta mml-mir-148b precursor miRNA

Gene family

MIPF0000056; mir-148

Sequence

101228 reads, 864 reads per million, 9 experiments

caagcacgauuagcauuugagguGAAGUUCUGUUAUACACUCAGGCUguggcucucugaaagUCAGUGCAUCACAGAACUUUGUcucgaaagcuuucua
.......((..(((.((((((((((((((((((.((.((((..((((.............)))))))).)).)))))))))))))))))).))).))..

Structure

caagcac  uu   a                  U  A    CA    guggc 
       ga  agc uuugagguGAAGUUCUGU AU CACU  GGCU     u
       ||  ||| |||||||||||||||||| || ||||  ||||     c
       cu  ucg aagcucUGUUUCAAGACA UA GUGA  CUga     u
-----au  -u   a                  C  C    --    aaguc 

Annotation confidence High

Genome context

chr11: 53018095-53018193 [+]

Mature mml-miR-148b-3p

• Accession: MIMAT0006209
• Description: Macaca mulatta mml-miR-148b-3p mature miRNA
• Sequence: 63 - UCAGUGCAUCACAGAACUUUGU - 84
• Evidence: experimental ; Illumina [2]

Mature mml-miR-148b-5p

• Accession: MIMAT0026826
• Description: Macaca mulatta mml-miR-148b-5p mature miRNA
• Sequence: 24 - GAAGUUCUGUUAUACACUCAGGCU - 47
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45