miRBase entry: mml-mir-154

Stem-loop mml-mir-154


Accession
MI0007644
Description
Macaca mulatta mml-mir-154 precursor miRNA
Gene family
MIPF0000018; mir-154

Literature search
1 open access papers mention mml-mir-154
(1 sentences)

Sequence

932 reads, 8 reads per million, 9 experiments
gagguacuugaagaUAGGUUAUCCGUGUUGCCUUCGcuuuauuugugacgAAUCAUACACGGUUGACCUAUUuuucaguaccaa
..((((((.((((((((((((.((((((((.(.((((.......)))).)...)).)))))).)))))))))))).))))))..

Structure
ga      u            U      -  --C U    uu 
  gguacu gaagaUAGGUUA CCGUGU UG   C UCGc  u
  |||||| |||||||||||| |||||| ||   | ||||  a
  ccauga uuuUUAUCCAGU GGCACA AC   g agug  u
aa      c            U      U  UAA c    uu 


Annotation confidence High
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Genome context
chr7: 163393750-163393833 [+]
Clustered miRNAs
14 other miRNAs are < 10 kb from mml-mir-154
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-154-5p

Accession MIMAT0006215
Description Macaca mulatta mml-miR-154-5p mature miRNA
Sequence 15 - UAGGUUAUCCGUGUUGCCUUCG - 36
Evidence experimental
Illumina [2]

Mature mml-miR-154-3p

Accession MIMAT0026830
Description Macaca mulatta mml-miR-154-3p mature miRNA
Sequence 51 - AAUCAUACACGGUUGACCUAUU - 72
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45