miRBase entry: mml-mir-212

Stem-loop mml-mir-212


Accession
MI0007671
Description
Macaca mulatta mml-mir-212 precursor miRNA
Gene family
MIPF0000065; mir-132


Sequence

1148 reads, 15 reads per million, 9 experiments
cggggcaccccgcccggacagcgcgccggcACCUUGGCUCUAGACUGCUUACUgcccgggccgcccucagUAACAGUCUCCAGUCAGGGCCaccgacgccuggccccgcc
((((((...((....)).(((.(((.(((..((((((((..((((((.((((((...(((...))).))))))))))))..))))))))...))).))))))))))))..

Structure
--      accccgcccgga   c   c   -cA        CU      C      ccc   c 
  cggggc            cag gcg cgg   CCUUGGCU  AGACUG UUACUg   ggg  
  ||||||            ||| ||| |||   ||||||||  |||||| ||||||   ||| c
  gccccg            guc cgc gcc   GGGACUGA  UCUGAC AAUgac   ccc  
cc      ------------   -   a   aCC        CC      -      --u   g 


Annotation confidence High
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Genome context
chr16: 1943555-1943664 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mml-mir-212
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-212-3p

Accession MIMAT0006241
Description Macaca mulatta mml-miR-212-3p mature miRNA
Sequence 71 - UAACAGUCUCCAGUCAGGGCC - 91
Evidence experimental
Illumina [2]

Mature mml-miR-212-5p

Accession MIMAT0026847
Description Macaca mulatta mml-miR-212-5p mature miRNA
Sequence 31 - ACCUUGGCUCUAGACUGCUUACU - 53
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8

  2. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45