Stem-loop sequence mml-mir-369

Accession

MI0007713 (change log)

Description

Macaca mulatta miR-369 stem-loop

Gene family

MIPF0000018; mir-154

Stem-loop

   u   ag               ua      cuuua 
5'  uga  ggagaucgaccgugu  uauucg     u
    |||  |||||||||||||||  ||||||      
3'  acu  uuucuaguugguaca  auaagc     u
   g   cu               ua      uucag 

Deep sequencing

20196 reads, 77.8 reads per million, 9 experiments

Confidence

Annotation confidence: high

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Genome context

• Coordinates (Mmul_8.0.1; GCA_000772875.3): chr7: 163399393-163399462 [+]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from mml-mir-369

• mml-mir-485: chr7: 163389434-163389506 [+]
• mml-mir-323b: chr7: 163390241-163390297 [+]
• mml-mir-154: chr7: 163393750-163393833 [+]
• mml-mir-496: chr7: 163394601-163394702 [+]
• mml-mir-377: chr7: 163395850-163395918 [+]
• mml-mir-541: chr7: 163398288-163398371 [+]
• mml-mir-409: chr7: 163399096-163399174 [+]
• mml-mir-412: chr7: 163399243-163399333 [+]
• mml-mir-369: chr7: 163399393-163399462 [+]
• mml-mir-410: chr7: 163399706-163399785 [+]
• mml-mir-656: chr7: 163400519-163400596 [+]

Database links

• EntrezGene:MIR369
• RNAcentral:URS000075D5A7_9544
• miRBase Tracker:MI0007713

Mature sequence mml-miR-369-5p

• Accession: MIMAT0006293
• Sequence: 9 - agaucgaccguguuauauucgc - 30
• Deep sequencing: 1944 reads, 9 experiments
• Evidence: by similarity; MI0000777
• Predicted targets:
  • TargetScanVert:mml-miR-369-5p

Mature sequence mml-miR-369-3p

• Accession: MIMAT0006294
• Sequence: 44 - aauaauacaugguugaucuuu - 64
• Deep sequencing: 18251 reads, 9 experiments
• Evidence: by similarity; MI0000777
• Database links:
  • RNAcentral:URS0000442B0D_9544
• Predicted targets:
  • TargetScanVert:mml-miR-369-3p

References

1. PMID:18186931 "Identification of novel homologous microRNA genes in the rhesus macaque genome" Yue J, Sheng Y, Orwig KE BMC Genomics. 9:8(2008).