Stem-loop mml-mir-449a

Accession

MI0007747

Description

Macaca mulatta mml-mir-449a precursor miRNA

Gene family

MIPF0000133; mir-449

Sequence

3962 reads, 316 reads per million, 9 experiments

cugugugugaugagcUGGCAGUGUAUUGUUAGCUGGUugaauaugugaauggcauCAGCUAACAUGCAACUGCUGUCuuauugcauauaca
.(((((((((((((.(((((((((((.((((((((((.(..(((....))).))))))))))))))).))))))).)))))))))))))..

Structure

-c             c       -    U          u aa   g 
  ugugugugaugag UGGCAGU GUAU GUUAGCUGGU g  uau u
  ||||||||||||| ||||||| |||| |||||||||| |  |||  
  auauacguuauuC GUCGUCA CGUA CAAUCGACua c  gua g
ac             U       A    -          - -g   a 

Annotation confidence Not enough data

Genome context

chr6: 56077670-56077760 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-449a

Mature mml-miR-449a-5p

• Accession: MIMAT0006330
• Description: Macaca mulatta mml-miR-449a-5p mature miRNA
• Sequence: 16 - UGGCAGUGUAUUGUUAGCUGGU - 37
• Evidence: experimental ; Illumina [2]

Mature mml-miR-449a-3p

• Accession: MIMAT0026876
• Description: Macaca mulatta mml-miR-449a-3p mature miRNA
• Sequence: 56 - CAGCUAACAUGCAACUGCUGUC - 77
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45