Stem-loop mml-mir-493

Accession

MI0007767

Description

Macaca mulatta mml-mir-493 precursor miRNA

Gene family

MIPF0000230; mir-493

Sequence

2221 reads, 19 reads per million, 9 experiments

cuggccuccagggcuUUGUACAUGGUAGGCUUUCAUUcauucguuugcacauucggUGAAGGUCUACUGUGUGCCAGGcccugugccag
(((((...((((((((.((((((((((((((((((((.................)))))))))))))))))))).)))))))).)))))

Structure

     cuc        U                    cauucgu 
cuggc   cagggcuU GUACAUGGUAGGCUUUCAUU       u
|||||   |||||||| ||||||||||||||||||||       u
gaccg   gucccGGA CGUGUGUCAUCUGGAAGUgg       g
     --u        C                    cuuacac 

Annotation confidence High

Genome context

chr7: 163202837-163202925 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mml-mir-493

Mature mml-miR-493-3p

• Accession: MIMAT0006355
• Description: Macaca mulatta mml-miR-493-3p mature miRNA
• Sequence: 57 - UGAAGGUCUACUGUGUGCCAGG - 78
• Evidence: experimental ; Illumina [2]

Mature mml-miR-493-5p

• Accession: MIMAT0026884
• Description: Macaca mulatta mml-miR-493-5p mature miRNA
• Sequence: 16 - UUGUACAUGGUAGGCUUUCAUU - 37
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45