miRBase entry: mml-mir-516a-1

Stem-loop mml-mir-516a-1


Accession
MI0007785
Description
Macaca mulatta mml-mir-516a-1 precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

65 reads, 12 reads per million, 5 experiments
ucucaggcugugaccGUCUCGAGGAAAGAAGCACUUUcuguugucuaaagaaaaggaagUGUUUCCUUCCCGAGGGUuacgguuugaga
(((((((((((((((..((((.((((.((((((((((((.((........)).)))))))))))).)))))))))))))))))))))))

Structure
               GU    A    A            g  guc 
ucucaggcugugacc  CUCG GGAA GAAGCACUUUcu uu   u
|||||||||||||||  |||| |||| |||||||||||| ||    
agaguuuggcauUGG  GAGC CCUU CUUUGUgaagga aa   a
               --    -    C            a  gaa 


Annotation confidence Not enough data
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Genome context
chr19: 49109628-49109716 [+]
Clustered miRNAs
6 other miRNAs are < 10 kb from mml-mir-516a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-516a-5p

Accession MIMAT0006373
Description Macaca mulatta mml-miR-516a-5p mature miRNA
Sequence 16 - GUCUCGAGGAAAGAAGCACUUU - 37
Evidence not_experimental

Mature mml-miR-516a-3p

Accession MIMAT0006374
Description Macaca mulatta mml-miR-516a-3p mature miRNA
Sequence 60 - UGUUUCCUUCCCGAGGGU - 77
Evidence not_experimental

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8