miRBase entry: mml-mir-518a-1

Stem-loop mml-mir-518a-1


Accession
MI0007789
Description
Macaca mulatta mml-mir-518a-1 precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

48 reads, 11 reads per million, 4 experiments
ucucaugcugugaccCUACAAAGGGAAGCCCUUUCUguugucuaaacgaaaagAAAGUGCUUCUCUUUGCUGGGuuacgguuugaga
(((((.((((((((((..(((((((((((.((((((.((((....))))..)))))).)))))))))))..)))))))))).)))))

Structure
     u          UA           C      -g    c 
ucuca gcugugaccC  CAAAGGGAAGC CUUUCU  uugu u
||||| ||||||||||  ||||||||||| ||||||  ||||  
agagu uggcauuGGG  GUUUCUCUUCG GAAAga  agca a
     u          UC           U      aa    a 


Annotation confidence Not enough data
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Genome context
chr19: 49066416-49066502 [+]
Clustered miRNAs
6 other miRNAs are < 10 kb from mml-mir-518a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-518a-5p

Accession MIMAT0006377
Description Macaca mulatta mml-miR-518a-5p mature miRNA
Sequence 16 - CUACAAAGGGAAGCCCUUUCU - 36
Evidence not_experimental

Mature mml-miR-518a-3p

Accession MIMAT0006378
Description Macaca mulatta mml-miR-518a-3p mature miRNA
Sequence 54 - AAAGUGCUUCUCUUUGCUGGG - 74
Evidence not_experimental

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8