miRBase entry: mml-mir-518b

Stem-loop mml-mir-518b


Accession
MI0007790
Description
Macaca mulatta mml-mir-518b precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

138 reads, 23 reads per million, 3 experiments
ucaggcugugacccuccagagggaagcacuuucuguugucugaaagaaagCAAAGCGCUCCCCUUUAGAGGauuacgguuuga
(((((((((((.((((.((((((.(((.(((..((((.(((...))).))))))).))).)))))).)))).)))))))))))

Structure
           c    c      a   a   uc    g   g 
ucaggcuguga ccuc agaggg agc cuu  uguu ucu  
||||||||||| |||| |||||| ||| |||  |||| ||| a
aguuuggcauu GGAG UUUCCC UCG GAA  ACga aga  
           a    A      C   C   --    a   a 


Annotation confidence Not enough data
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Genome context
chr19: 49048495-49048577 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from mml-mir-518b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-518b

Accession MIMAT0006379
Description Macaca mulatta mml-miR-518b mature miRNA
Sequence 51 - CAAAGCGCUCCCCUUUAGAGG - 71
Evidence not_experimental

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8