miRBase entry: mml-mir-939

Stem-loop mml-mir-939


Accession
MI0007935
Description
Macaca mulatta mml-mir-939 precursor miRNA
Gene family
MIPF0000490; mir-939


Sequence

49 reads, 1 reads per million, 9 experiments
ugugggcagggcccUGGGGAGCUGAGGCUCUGGGGGUGgccggggcugaccccugggccucugcuccccagugucugaccgug
....((..((((.(((((((((.(((((((.((((..(((....)))..)))).))))))).))))))))).))))..))...

Structure
ugug  ca    c         U       U    GU   c 
    gg  gggc cUGGGGAGC GAGGCUC GGGG  Ggc g
    ||  |||| ||||||||| ||||||| ||||  |||  
    cc  ucug gaccccucg cuccggg cccc  ucg g
-gug  ag    u         u       u    ag   g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr8: 143638752-143638834 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mml-mir-939
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-939

Accession MIMAT0006540
Description Macaca mulatta mml-miR-939 mature miRNA
Sequence 15 - UGGGGAGCUGAGGCUCUGGGGGUG - 38
Evidence not_experimental

References

  1. PubMed ID: 18186931
    Identification of novel homologous microRNA genes in the rhesus macaque genome
    Yue J, Sheng Y, Orwig KE
    BMC Genomics (2008) 9:8