miRBase entry: cfa-mir-33a

Stem-loop cfa-mir-33a


Accession
MI0007988
Description
Canis familiaris cfa-mir-33a precursor miRNA
Gene family
MIPF0000070; mir-33


Sequence

GUGCAUUGUAGUUGCAUUGCauguucuggcgguacccgugcaauguuuccacagugcauca
(((((((((.(..((((((((((....((.....))))))))))))..).)))))))))..

Structure
--         A UU          uucu  c 
  GUGCAUUGU G  GCAUUGCaug    gg g
  ||||||||| |  ||||||||||    || g
  uacgugaca c  uguaacgugc    cc u
ac         c uu          ----  a 


Annotation confidence Not enough data
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Genome context
chr10: 23456613-23456673 [-]

Database links

Mature cfa-miR-33a

Accession MIMAT0006593
Description Canis familiaris cfa-miR-33a mature miRNA
Sequence 1 - GUGCAUUGUAGUUGCAUUGC - 20
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415