Stem-loop cfa-mir-1835

Accession

MI0007991

Description

Canis familiaris cfa-mir-1835 precursor miRNA

Sequence

UGCACCCUGAGAGCUGGAGCAGgucucuuacgggaaccaucuucaacucuguggaugcagg
((((.((..((((.(((((..((((((....))).)))..))))).))))..)).))))..

Structure

--    C  UG    C     CA   -   u 
  UGCA CC  AGAG UGGAG  Ggu cuc u
  |||| ||  |||| |||||  ||| |||  
  acgu gg  ucuc acuuc  cca ggg a
gg    a  ug    a     ua   a   c 

Annotation confidence Not enough data

Genome context

chr10: 27296054-27296114 [+]

Mature cfa-miR-1835

• Accession: MIMAT0006596
• Description: Canis familiaris cfa-miR-1835 mature miRNA
• Sequence: 1 - UGCACCCUGAGAGCUGGAGCAG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415