miRBase entry: cfa-mir-128-1

Stem-loop cfa-mir-128-1


Accession
MI0008032
Description
Canis familiaris cfa-mir-128-1 precursor miRNA
Gene family
MIPF0000048; mir-128


Sequence

cggggccguagcacugucugagagguuuacauuucUCACAGUGAACCGGUCUCUUU
.(((((((...((((((..(((((((....)))))))))))))...)))))))...

Structure
--c       uag      cu       u 
   ggggccg   cacugu  gagaggu u
   |||||||   ||||||  |||||||  
   CUCUGGC   GUGACA  CUcuuua a
UUU       CAA      --       c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr19: 38435956-38436011 [+]

Database links

Mature cfa-miR-128

Accession MIMAT0006633
Description Canis familiaris cfa-miR-128 mature miRNA
Sequence 36 - UCACAGUGAACCGGUCUCUUU - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415