Stem-loop cfa-mir-7-1

Accession

MI0008033

Description

Canis familiaris cfa-mir-7-1 precursor miRNA

Gene family

MIPF0000022; mir-7

Sequence

UGGAAGACUAGUGAUUUUGUUGUuuuuagauaacuaaaucgacaacaaaucacagucugccaua
(((.(((((.(((((((.(((((((((((....)))))..)))))))))))))))))).)))..

Structure

--   A     A       U      --     a 
  UGG AGACU GUGAUUU GUUGUu  uuuag u
  ||| ||||| ||||||| ||||||  |||||  
  acc ucuga cacuaaa caacag  aaauc a
au   g     -       -      cu     a 

Annotation confidence Not enough data

Genome context

chr1: 75509765-75509828 [+]

Mature cfa-miR-7

• Accession: MIMAT0006634
• Description: Canis familiaris cfa-miR-7 mature miRNA
• Sequence: 1 - UGGAAGACUAGUGAUUUUGUUGU - 23
• Evidence: not_experimental

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415