miRBase entry: cfa-mir-181d

Stem-loop cfa-mir-181d


Accession
MI0008035
Description
Canis familiaris cfa-mir-181d precursor miRNA
Gene family
MIPF0000007; mir-181


Sequence

AACAUUCAUUGUUGUCGGUGGGUugugaggacggaggccagacccaccgagggaugaaugucac
.(((((((((....((((((((((....((.(....))).))))))))))..)))))))))...

Structure
--A         GUUG          guga  a g 
   ACAUUCAUU    UCGGUGGGUu    gg c g
   |||||||||    ||||||||||    || |  
   uguaaguag    agccacccag    cc g a
cac         --gg          ---a  - g 


Annotation confidence Not enough data
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Genome context
chr20: 48593158-48593221 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cfa-mir-181d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-181d

Accession MIMAT0006636
Description Canis familiaris cfa-miR-181d mature miRNA
Sequence 1 - AACAUUCAUUGUUGUCGGUGGGU - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415